Gene
npas1
- ID
- ZDB-GENE-060503-934
- Name
- neuronal PAS domain protein 1
- Symbol
- npas1 Nomenclature History
- Previous Names
-
- npas3b
- si:dkeyp-13e2.1
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nuclear chromatin. Orthologous to human NPAS1 (neuronal PAS domain protein 1).
- Genome Resources
- Note
-
The nomenclature for this gene has been updated (September 2016) to npas1 as supported by AA alignment, synteny and phylogenetic tree data.
- Comparative Information
-
- All Expression Data
- 2 figures from Diotel et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000014 | PAS domain |
| Domain | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| Domain | IPR013655 | PAS fold-3 |
| Domain | IPR013767 | PAS fold |
| Homologous_superfamily | IPR035965 | PAS domain superfamily |
| Homologous_superfamily | IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Length | Helix-loop-helix DNA-binding domain superfamily | Myc-type, basic helix-loop-helix (bHLH) domain | PAS domain | PAS domain superfamily | PAS fold | PAS fold-3 |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A2R8Q2I0
|
770 |
Interactions and Pathways
No data available
Plasmids
No data available