ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-30c15.12
- ID
- ZDB-GENE-060503-920
- Name
- si:dkey-30c15.12
- Symbol
- si:dkey-30c15.12 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable calcium ion binding activity. Predicted to be involved in several processes, including embryonic morphogenesis; homophilic cell-cell adhesion; and neuron migration. Predicted to be located in several cellular components, including Golgi apparatus; adherens junction; and endosome. Predicted to be part of catenin complex. Human ortholog(s) of this gene implicated in several diseases, including blepharocheilodontic syndrome 1; breast cancer (multiple); carcinoma (multiple); cervix uteri carcinoma in situ; and reproductive organ cancer (multiple). Orthologous to human CDH1 (cadherin 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin | Cadherin conserved site | Cadherin-like | Cadherin-like superfamily | Cadherin, Y-type LIR-motif | Catenin binding domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0AB13A7X0 | InterPro | 789 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-30c15.12-201
(1)
|
Ensembl | 2,213 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers