Gene
trim108
- ID
- ZDB-GENE-060503-670
- Name
- tripartite motif containing 108
- Symbol
- trim108 Nomenclature History
- Previous Names
-
- si:ch211-154o6.7 (1)
- zgc:153797
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in innate immune response. Predicted to be active in cytoplasm. Orthologous to several human genes including TRIM34 (tripartite motif containing 34); TRIM39 (tripartite motif containing 39); and TRIM5 (tripartite motif containing 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR000315 | B-box-type zinc finger |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR001870 | B30.2/SPRY domain |
| Domain | IPR003879 | Butyrophylin-like, SPRY domain |
| Domain | IPR027370 | Zinc finger, RING-type, eukaryotic |
| Family | IPR050143 | Tripartite motif-containing |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR043136 | B30.2/SPRY domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | B30.2/SPRY domain | B30.2/SPRY domain superfamily | B-box-type zinc finger | Butyrophylin-like, SPRY domain | Concanavalin A-like lectin/glucanase domain superfamily | Tripartite motif-containing | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site | Zinc finger, RING-type, eukaryotic |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3B1L7 | InterPro | 334 | ||||||||||
| UniProtKB:Q1LXQ6 | InterPro | 494 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| antisense |
ottdart00000060001
(1)
|
Ensembl | 1,478 nt | ||
| mRNA |
trim108-201
(1)
|
Ensembl | 1,751 nt | ||
| mRNA |
trim108-202
(1)
|
Ensembl | 596 nt | ||
| mRNA |
trim108-204
(1)
|
Ensembl | 752 nt | ||
| ncRNA |
trim108-002
(1)
|
Ensembl | 557 nt |
Interactions and Pathways
No data available
Plasmids
No data available