Gene
snx27a
- ID
- ZDB-GENE-060503-371
- Name
- sorting nexin 27a
- Symbol
- snx27a Nomenclature History
- Previous Names
-
- si:dkeyp-39e9.2
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to enable phosphatidylinositol binding activity. Acts upstream of or within axonogenesis and midbrain development. Predicted to be located in membrane. Predicted to be active in early endosome. Is expressed in head and spinal cord. Orthologous to human SNX27 (sorting nexin 27).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Yong et al., 2021
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Yong et al., 2021
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000159 | Ras-associating domain |
| Domain | IPR001478 | PDZ domain |
| Domain | IPR001683 | Phox homology |
| Domain | IPR037827 | SNX27, atypical FERM-like domain |
| Domain | IPR037833 | SNX27, PX domain |
| Domain | IPR037835 | SNX27, RA domain |
| Homologous_superfamily | IPR029071 | Ubiquitin-like domain superfamily |
| Homologous_superfamily | IPR036034 | PDZ superfamily |
| Homologous_superfamily | IPR036871 | PX domain superfamily |
Domain Details Per Protein
| Protein | Length | PDZ domain | PDZ superfamily | Phox homology | PX domain superfamily | Ras-associating domain | SNX27, atypical FERM-like domain | SNX27, PX domain | SNX27, RA domain | Ubiquitin-like domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q1L8B0
|
567 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
snx27a-201
(1)
|
Ensembl | 2,099 nt |
Interactions and Pathways
No data available
Plasmids
No data available