Gene

ptprua

ID
ZDB-GENE-060503-232
Name
protein tyrosine phosphatase receptor type Ua
Symbol
ptprua Nomenclature History
Previous Names
  • si:ch211-82g18.1
  • si:dkey-153p21.2
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in neuron projection development and signal transduction. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in membrane. Orthologous to human PTPRU (protein tyrosine phosphatase receptor type U).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from van Eekelen et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa36806Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
1 - 1 of 1
Show
Sequence Targeting Reagents
No data available
Human Disease
Associated With ptprua Human Ortholog
No data available
Associated With ptprua Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Active_site IPR016130 Protein-tyrosine phosphatase, active site
Domain IPR000242 Tyrosine-specific protein phosphatase, PTPase domain
Domain IPR000387 Tyrosine-specific protein phosphatases domain
Domain IPR000998 MAM domain
Domain IPR003595 Protein-tyrosine phosphatase, catalytic
1 - 5 of 13 Show all
Domain Details Per Protein
Protein Length Concanavalin A-like lectin/glucanase domain superfamily Fibronectin type III Fibronectin type III superfamily Immunoglobulin domain subtype Immunoglobulin-like domain superfamily Immunoglobulin-like fold MAM domain Protein-tyrosine phosphatase, active site Protein-tyrosine phosphatase, catalytic Protein-tyrosine phosphatase-like Receptor-type Tyrosine-protein Phosphatases Tyrosine-specific protein phosphatase, PTPase domain Tyrosine-specific protein phosphatases domain
UniProtKB:A0A2R8QCZ8
InterPro
1478
UniProtKB:A0A8M3AVF9
InterPro
1451
UniProtKB:A0A0R4IMC4
InterPro
1472
UniProtKB:A0A8M3B3F6
InterPro
1475
UniProtKB:F1Q6E0
InterPro
1454
1 - 5 of 6 Show all
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 19
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ptprua-201 (1)
Ensembl
Ensembl 5,837 nt
ZFIN BLAST
mRNA ptprua-202 (1)
Ensembl
Ensembl 761 nt
ZFIN BLAST
mRNA ptprua-203 (1)
Ensembl
Ensembl 8,305 nt
ZFIN BLAST
mRNA ptprua-204 (1)
Ensembl
Ensembl 8,323 nt
ZFIN BLAST
mRNA ptprua-205 (1)
Ensembl
Ensembl 8,269 nt
ZFIN BLAST
1 - 5 of 5
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-1K7ZFIN Curated Data
Contained inBACCH211-82G18ZFIN Curated Data
Contained inBACCH211-196L2ZFIN Curated Data
Contained inBACDKEY-153P21ZFIN Curated Data
Contained inBACDKEY-155F13ZFIN Curated Data
1 - 5 of 5
Show
Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_005159552 (1)5900 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:AL929594 (2)188746 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A2R8QCZ8 (1)1478 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
TSV
1 - 4 of 4
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.