ZFIN is now using GRCz12tu for Genomic Data
Gene
pou2f2a
- ID
- ZDB-GENE-060310-2
- Name
- POU class 2 homeobox 2a
- Symbol
- pou2f2a Nomenclature History
- Previous Names
-
- Oct2a (1)
- pou2f2
- id:ibd5128
- im:7160081
- si:dkey-3j24.1
- Type
- protein_coding_gene
- Location
- Ambiguous Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Is expressed in forebrain; immature eye; and midbrain. Orthologous to human POU2F2 (POU class 2 homeobox 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7160081 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017970 | Homeobox, conserved site |
| Domain | IPR000327 | POU-specific domain |
| Domain | IPR001356 | Homeodomain |
| Domain | IPR013847 | POU domain |
| Family | IPR000972 | Octamer-binding transcription factor |
| Family | IPR050255 | POU domain transcription factor |
| Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
| Homologous_superfamily | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Homedomain-like superfamily | Homeobox, conserved site | Homeodomain | Lambda repressor-like, DNA-binding domain superfamily | Octamer-binding transcription factor | POU domain | POU domain transcription factor | POU-specific domain |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9P294 | InterPro | 676 | ||||||||
| UniProtKB:A0AB32T652 | InterPro | 580 | ||||||||
| UniProtKB:A0AC58HZY4 | InterPro | 721 | ||||||||
| UniProtKB:A0AC58HZY8 | InterPro | 710 | ||||||||
| UniProtKB:A0AC58HZZ4 | InterPro | 603 | ||||||||
| UniProtKB:A0AC58I004 | InterPro | 614 | ||||||||
| UniProtKB:A0AC58I021 | InterPro | 569 | ||||||||
| UniProtKB:A0A8M3B3B2 | InterPro | 687 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pou2f2-203
(1)
|
Ensembl | 1,815 nt | ||
| mRNA |
pou2f2a-205
(1)
|
Ensembl | 6,150 nt | ||
| ncRNA |
pou2f2a-002
(1)
|
Ensembl | 756 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance