Gene

sparcl1

ID
ZDB-GENE-060130-6
Name
SPARC-like 1
Symbol
sparcl1 Nomenclature History
Previous Names
  • SPARCL1 (1)
  • sparcl (1)
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity; collagen binding activity; and extracellular matrix binding activity. Predicted to be involved in anatomical structure development. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in lens. Orthologous to human SPARCL1 (SPARC like 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Vihtelic et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sparcl1 Human Ortholog
No data available
Associated With sparcl1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Conserved_site IPR001999 Osteonectin-like, conserved site
Domain IPR002048 EF-hand domain
Domain IPR002350 Kazal domain
Domain IPR003645 Follistatin-like, N-terminal
Domain IPR015369 Follistatin/Osteonectin EGF domain
Domain IPR019577 SPARC/Testican, calcium-binding domain
Homologous_superfamily IPR011992 EF-hand domain pair
Homologous_superfamily IPR036058 Kazal domain superfamily
Domain Details Per Protein
Protein Length EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair Follistatin-like, N-terminal Follistatin/Osteonectin EGF domain Kazal domain Kazal domain superfamily Osteonectin-like, conserved site SPARC/Testican, calcium-binding domain
UniProtKB:B3DJ32 606
UniProtKB:A0A0R4IIF9 246
UniProtKB:Q6PVV6 224
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations