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ZIRC
ZFIN ID: ZDB-GENE-060126-2
Gene Name: Bardet-Biedl syndrome 4
Gene Symbol: bbs4
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:152964

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in several processes, including Kupffer's vesicle development; embryonic morphogenesis; and establishment of pigment granule localization. Used to study Bardet-Biedl syndrome and ciliopathy.  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa258 Point Mutation Unknown Premature Stop ENU
sa11279 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH bbs4 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Bardet-Biedl syndrome 4 Bardet-Biedl syndrome 4 615982
    DISEASE ASSOCIATED WITH bbs4 VIA EXPERIMENTAL MODELS
    Human Disease Fish Conditions Citations
    Bardet-Biedl syndrome AB/EKW + MO1-bbs4 standard conditions Wang et al., 2011
    ciliopathy AB/EKW + MO1-bbs4 standard conditions Wang et al., 2011
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axis elongation involved in somitogenesis (more)
    GO Terms (all 16)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA bbs4-002 (1) 779
    aberrant processed transcript bbs4-201 (1) 2324
    mRNA bbs4-202 (1) 2367
    antisense ottdart00000059890 (1) 501
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM bbs4 No data available
    MARKER RELATIONSHIPS
    bbs4Contained in: [BAC] CH211-117K16 (order this)
    bbs4Encodes: [cDNA] MGC:191574 (1) (order this)
    bbs4Has Artifact: [cDNA] MGC:152964 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077466 (1) 2333bp
    Genomic GenBank:BX957346 (1) 149598bp
    Select Tool
    Polypeptide UniProtKB:E7EXH4 (1) 528aa
    Sequence Clusters UniGene:86212 (1)
    Sequence Information (all 18)
    ORTHOLOGY for bbs4 (Chr: 25)
    CITATIONS (38)