Gene

trmo

ID

ZDB-GENE-051023-15

Name

tRNA methyltransferase O

Symbol

trmo Nomenclature History

Previous Names

zgc:123172

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have tRNA (adenine-N6-)-methyltransferase activity. Orthologous to human TRMO (tRNA methyltransferase O).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trmo Human Ortholog

No data available

Associated With trmo Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR023370	TrmO-like, N-terminal domain
Family	IPR040372	YaeB-like
Homologous_superfamily	IPR036413	YaeB-like superfamily
Homologous_superfamily	IPR036414	YaeB, N-terminal domain superfamily

Domain Details Per Protein

Protein	Length	TrmO-like, N-terminal domain	YaeB-like	YaeB-like superfamily	YaeB, N-terminal domain superfamily
UniProtKB:R4GEK9 InterPro	452
UniProtKB:F1Q8W7 InterPro	302

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	trmo-201 (1) Ensembl	Ensembl		1,363 nt	Select Tool ZFIN BLAST
mRNA	trmo-202 (1) Ensembl	Ensembl		1,646 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations