Gene

dpf1

ID

ZDB-GENE-050913-31

Name

double PHD fingers 1

Symbol

dpf1 Nomenclature History

Previous Names

zgc:110104 (1)

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have histone acetyltransferase activity and histone binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated; nervous system development; and positive regulation of transcription by RNA polymerase II. Predicted to localize to histone acetyltransferase complex and nBAF complex. Is expressed in brain; olfactory placode; and telencephalon. Orthologous to human DPF1 (double PHD fingers 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:110104 (8 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With dpf1 Human Ortholog

No data available

Associated With dpf1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001965	Zinc finger, PHD-type
Domain	IPR013087	Zinc finger C2H2-type
Domain	IPR019787	Zinc finger, PHD-finger
Domain	IPR025750	DPF1-3, N-terminal domain
Family	IPR051580	Zinc finger and chromatin remodeling-associated protein
Homologous_superfamily	IPR011011	Zinc finger, FYVE/PHD-type
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily

Domain Details Per Protein

Protein	Length	DPF1-3, N-terminal domain	Zinc finger and chromatin remodeling-associated protein	Zinc finger C2H2 superfamily	Zinc finger C2H2-type	Zinc finger, FYVE/PHD-type	Zinc finger, PHD-finger	Zinc finger, PHD-type	Zinc finger, RING/FYVE/PHD-type
UniProtKB:A0A8M1P4C0 InterPro	407
UniProtKB:A0A0R4IJH1 InterPro	302
UniProtKB:A0A8M2BL31 InterPro	405

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	dpf1-201 (1) Ensembl	Ensembl	1,200 nt	Select Tool ZFIN BLAST
mRNA	dpf1-202 (1) Ensembl	Ensembl	769 nt	Select Tool ZFIN BLAST
mRNA	dpf1-203 (1) Ensembl	Ensembl	1,385 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations