ZFIN is now using GRCz12tu for Genomic Data
Gene
ankrd13b
- ID
- ZDB-GENE-050913-151
- Name
- ankyrin repeat domain 13B
- Symbol
- ankrd13b Nomenclature History
- Previous Names
-
- zgc:113371
- zmp:0000000548
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin-modified protein reader activity. Predicted to be involved in regulation of receptor-mediated endocytosis. Predicted to be located in membrane and perinuclear region of cytoplasm. Predicted to be active in late endosome and plasma membrane. Orthologous to human ANKRD13B (ankyrin repeat domain 13B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR003903 | Ubiquitin interacting motif |
| Domain | IPR055285 | Ankyrin repeat domain-containing protein 13, C-terminal |
| Family | IPR021832 | Ankyrin repeat domain-containing protein 13 |
| Homologous_superfamily | IPR036770 | Ankyrin repeat-containing domain superfamily |
| Repeat | IPR002110 | Ankyrin repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Ankyrin repeat | Ankyrin repeat-containing domain superfamily | Ankyrin repeat domain-containing protein 13 | Ankyrin repeat domain-containing protein 13, C-terminal | Ubiquitin interacting motif |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M6YT16 | InterPro | 588 | |||||
| UniProtKB:E7F2R4 | InterPro | 632 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ankrd13b-201
(1)
|
Ensembl | 3,968 nt | ||
| mRNA |
ankrd13b-202
(1)
|
Ensembl | 1,452 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance