ZFIN is now using GRCz12tu for Genomic Data
Gene
obsl1b
- ID
- ZDB-GENE-050809-29
- Name
- obscurin like cytoskeletal adaptor 1b
- Symbol
- obsl1b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in Golgi organization and positive regulation of dendrite morphogenesis. Predicted to be located in Golgi apparatus and perinuclear region of cytoplasm. Human ortholog(s) of this gene implicated in 3-M syndrome. Orthologous to human OBSL1 (obscurin like cytoskeletal adaptor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7153054 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| 3-M syndrome | Alliance | 3-M syndrome 2 | 612921 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013098 | Immunoglobulin I-set |
| Family | IPR052385 | Obscurin and Obscurin-like Regulators |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
obsl1b-201
(1)
|
Ensembl | 7,196 nt | ||
| mRNA |
obsl1b-202
(1)
|
Ensembl | 11,821 nt | ||
| mRNA |
obsl1b-203
(1)
|
Ensembl | 7,262 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers