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ZIRC
ZFIN ID: ZDB-GENE-050626-106
Gene Name: syntaxin binding protein 1a
Gene Symbol: stxbp1a
Sequence Ontology ID : SO:0000704

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Previous Names: stxbp1, fj43h10, wu:fj36d12, wu:fj43h10, zgc:114171

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in vesicle docking involved in exocytosis. Human ortholog(s) of this gene implicated in West syndrome and early infantile epileptic encephalopathy 4. Orthologous to human  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028304Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • s3000 Small Deletion Exon 8 Frameshift, Premature Stop CRISPR
    sa23888 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43599 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH stxbp1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    early infantile epileptic encephalopathy 4 Epileptic encephalopathy, early infantile, 4 612164
    DISEASE ASSOCIATED WITH stxbp1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process vesicle docking involved in exocytosis (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001619 (1)
  • InterPro:IPR027482 (1)
  • InterPro:IPR036045 (1)
  • Pfam:PF00995 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA stxbp1a-201 (1) 3473
    stxbp1a-202 (1) 1137
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM stxbp1a No data available
    MARKER RELATIONSHIPS
    stxbp1aContained in: [BAC] CH211-86K6 (1) (order this)
    stxbp1aEncodes: [EST] fj36d12, fj43h10, IMAGE:7147420 (1) (order this)
    [cDNA] MGC:114171 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025182 (1) 1828bp
    Genomic GenBank:BX470221 (1) 155895bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IQM9 (1) 603aa
    Sequence Clusters UniGene:80263 (1)
    Sequence Information (all 19)
    ORTHOLOGY for stxbp1a (Chr: 21)
    CITATIONS (29)