ZFIN is now using GRCz12tu for Genomic Data
Gene
pcdh1g26
- ID
- ZDB-GENE-050609-21
- Name
- protocadherin 1 gamma 26
- Symbol
- pcdh1g26 Nomenclature History
- Previous Names
-
- DrPcdh1g22 (1)
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cell adhesion molecule binding activity. Predicted to be involved in cell adhesion. Predicted to act upstream of or within homophilic cell-cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to several human genes including PCDHGC5 (protocadherin gamma subfamily C, 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020894 | Cadherin conserved site |
| Domain | IPR002126 | Cadherin-like |
| Domain | IPR013164 | Cadherin, N-terminal |
| Domain | IPR031904 | Cadherin, C-terminal catenin-binding domain |
| Family | IPR050174 | Protocadherin/Cadherin-related Cell Adhesion |
| Homologous_superfamily | IPR015919 | Cadherin-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin conserved site | Cadherin, C-terminal catenin-binding domain | Cadherin-like | Cadherin-like superfamily | Cadherin, N-terminal | Protocadherin/Cadherin-related Cell Adhesion |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:I6LC14 | InterPro | 957 | ||||||
| UniProtKB:A0A8M1N6M5 | InterPro | 957 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pcdh1g26-201
(1)
|
Ensembl | 4,348 nt | ||
| mRNA |
pcdh1g26-203
(1)
|
Ensembl | 596 nt | ||
| ncRNA |
pcdh1g26-002
(1)
|
Ensembl | 747 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers