Gene

stx18

ID

ZDB-GENE-050522-397

Name

syntaxin 18

Symbol

stx18 Nomenclature History

Previous Names

zgc:112326

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to have SNAP receptor activity. Predicted to be involved in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to localize to SNARE complex and endoplasmic reticulum. Orthologous to human STX18 (syntaxin 18).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:112326 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With stx18 Human Ortholog

No data available

Associated With stx18 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR006012	Syntaxin/epimorphin, conserved site
Domain	IPR019529	SNARE-complex protein Syntaxin-18, N-terminal

Domain Details Per Protein

Protein	Length	SNARE-complex protein Syntaxin-18, N-terminal	Syntaxin/epimorphin, conserved site
UniProtKB:A0A8M3BEW8 InterPro	323
UniProtKB:Q4VBI7 InterPro	314

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	stx18-201 (1) Ensembl	Ensembl		1,103 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations