Gene

cnot6l

ID
ZDB-GENE-050522-302
Name
CCR4-NOT transcription complex, subunit 6-like
Symbol
cnot6l Nomenclature History
Previous Names
  • zgc:111987
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to enable 3'-5'-RNA exonuclease activity. Predicted to act upstream of or within mRNA processing; regulation of translation; and regulatory ncRNA-mediated gene silencing. Predicted to be located in cytoplasm and nucleus. Predicted to be part of CCR4-NOT complex. Orthologous to human CNOT6L (CCR4-NOT transcription complex subunit 6 like).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cnot6l Human Ortholog
No data available
Associated With cnot6l Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005135 Endonuclease/exonuclease/phosphatase
Domain IPR034967 CCR4-NOT transcription complex subunit 6-like
Family IPR050410 CCR4/nocturin mRNA turnover and transcription
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Homologous_superfamily IPR036691 Endonuclease/exonuclease/phosphatase superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Additional Resources Length CCR4/nocturin mRNA turnover and transcription CCR4-NOT transcription complex subunit 6-like Endonuclease/exonuclease/phosphatase Endonuclease/exonuclease/phosphatase superfamily Leucine-rich repeat Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype
UniProtKB:A0A8M9PXK1 InterPro 549
UniProtKB:A2BHJ4 InterPro 559
UniProtKB:A0A8M9Q3B1 InterPro 407
UniProtKB:B2GPA8 InterPro 559
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cnot6l-201 (1)
Ensembl
Ensembl 2,613 nt
ZFIN BLAST
mRNA cnot6l-203 (1)
Ensembl
Ensembl 1,681 nt
ZFIN BLAST
ncRNA cnot6l-002 (1)
Ensembl
Ensembl 594 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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