Gene

lrmda

ID
ZDB-GENE-050522-285
Name
leucine rich melanocyte differentiation associated
Symbol
lrmda Nomenclature History
Previous Names
  • c10orf11 (1)
  • c13h10orf11
  • si:ch211-39f22.1
  • zgc:112463
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Involved in melanocyte differentiation. Acts upstream of or within pigmentation. Is expressed in cranium; mucus secreting cell; neural crest; neural plate; and trunk. Human ortholog(s) of this gene implicated in oculocutaneous albinism type VII. Orthologous to human LRMDA (leucine rich melanocyte differentiation associated).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Gronskov et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la027392TgTransgenic insertionUnknownUnknownDNA
la027393TgTransgenic insertionUnknownUnknownDNA
sa12051Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
1 - 3 of 3
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Human Disease
Associated With lrmda Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
oculocutaneous albinism type VII Alliance Albinism, oculocutaneous, type VII 615179
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Associated With lrmda Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR043313 Leucine-rich melanocyte differentiation-associated protein
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
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Domain Details Per Protein
Protein Additional Resources Length Leucine-rich melanocyte differentiation-associated protein Leucine-rich repeat Leucine-rich repeat domain superfamily
UniProtKB:Q501Y0 InterPro 234
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 13
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lrmda-201 (1) Ensembl 1,277 nt
mRNA lrmda-202 (1) Ensembl 1,514 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanLRMDA10
Amino acid sequence comparison (2)
Nucleotide sequence comparison (1)
Conserved genome location (synteny) (1)
Citations