ZFIN ID: ZDB-GENE-050506-134
Gene Name: low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
Gene Symbol: lrp8
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: apoer2 (1), im:7145907 (1), si:dkeyp-63d11.7 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity; predicted to localize to the integral component of membrane; orthologous to human LRP8 (LDL receptor related protein 8).
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2004 [IMAGE:7145907]
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH lrp8 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
{Myocardial infarction, susceptibility to} 608446
DISEASE ASSOCIATED WITH lrp8 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component integral component of membrane (more)
Molecular Function calcium ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000033 (1)
  • InterPro:IPR000152 (1)
  • InterPro:IPR000742 (1)
  • InterPro:IPR001881 (1)
  • InterPro:IPR002172 (1)
  • InterPro:IPR009030 (1)
  • InterPro:IPR011042 (1)
  • InterPro:IPR013032 (1)
  • InterPro:IPR018097 (1)
  • InterPro:IPR023415 (1)
  • InterPro:IPR036055 (1)
  • PROSITE:PS00010 (1)
  • PROSITE:PS01186 (1)
  • PROSITE:PS01187 (1)
  • PROSITE:PS01209 (1)
  • PROSITE:PS50026 (1)
  • PROSITE:PS50068 (1)
  • PROSITE:PS51120 (1)
  • Pfam:PF00057 (1)
  • Pfam:PF00058 (1)
  • Pfam:PF07645 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lrp8-201 (1) 8651
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lrp8 No data available
    MARKER RELATIONSHIPS
    lrp8Contained in: [BAC] DKEY-50M7 (1) (order this), DKEY-61C16 (1) (order this), DKEYP-63D11 (1)
    lrp8Encodes: [EST] IMAGE:7145907 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001256393 (1)
    Genomic RefSeq:NW_018395381 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:H3K2Y7 (1) 988aa
    Sequence Clusters UniGene:85885 (1)
    Sequence Information (all 27)
    OTHER lrp8 GENE PAGES
  • Alliance (1)
  • Gene:557734 (1)
  • VEGA:OTTDARG00000034633 (1)
  • ORTHOLOGY for lrp8 (Chr: 6)
    CITATIONS (21)