Gene

rad50

ID
ZDB-GENE-050506-110
Name
RAD50 homolog, double strand break repair protein
Symbol
rad50 Nomenclature History
Previous Names
  • im:6906849 (1)
  • si:ch211-79h18.3 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to contribute to 3'-5' exonuclease activity; DNA helicase activity; and single-stranded DNA endodeoxyribonuclease activity. Predicted to be involved in several processes, including DNA duplex unwinding; chromosome organization involved in meiotic cell cycle; and telomere maintenance. Predicted to localize to Mre11 complex and chromosome. Human ortholog(s) of this gene implicated in transitional cell carcinoma. Orthologous to human RAD50 (RAD50 double strand break repair protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rad50 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Nijmegen breakage syndrome-like disorder 613078
Associated With rad50 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013134 RAD50, zinc hook
Domain IPR038729 Rad50/SbcC-type AAA domain
Family IPR004584 DNA repair protein Rad50, eukaryotes
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length DNA repair protein Rad50, eukaryotes P-loop containing nucleoside triphosphate hydrolase Rad50/SbcC-type AAA domain RAD50, zinc hook
UniProtKB:A0A8N7UW22 1312
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rad50-201 (1) Ensembl 4,286 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations