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ZIRC
ZFIN ID: ZDB-GENE-050419-71
Gene Name: peptidoglycan recognition protein 5
Gene Symbol: pglyrp5    Nomenclature History

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Previous Names: PGRP-SC1a (1), PGRP-SC2 (1), si:ch211-202c21.3, si:dkey-113g17.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Exhibits N-acetylmuramoyl-L-alanine amidase activity. Involved in defense response to bacterium. Predicted to localize to the extracellular space. Is expressed in several structures, including cardiovascular system; gill; gut absorptive cell; liver; and pleuroperitoneal region. Orthologous to several human genes including PGLYRP1 (peptidoglycan recognition protein 1).
Genome Resources: Alliance (1),  Gene:553387 (1),  Ensembl(GRCz11):ENSDARG00000068382 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39212 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • y256Et Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-pglyrp5 N/A 1
    PHENOTYPE
    Data: Fig. 6 from Li et al., 2007
    Observed in:
    DISEASE ASSOCIATED WITH pglyrp5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pglyrp5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process defense response to bacterium (more)
    Molecular Function N-acetylmuramoyl-L-alanine amidase activity (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pglyrp5-201 (1)    Ensembl 1209
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pglyrp5 No data available
    MARKER RELATIONSHIPS
    pglyrp5 Contained in: [BAC] CH211-202C21 (1) (order this), DKEY-113G17 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044321 (1) 1219 bp
    Genomic GenBank:AL928979 193205 bp
    Select Tool
    Polypeptide UniProtKB:F1QTZ2 (1) 238 aa
    Sequence Clusters UniGene:87374 (1)
    Sequence Information (all 14)
    ORTHOLOGY for pglyrp5 ( Chr: 18 )
    CITATIONS (24)