ZFIN ID: ZDB-GENE-050417-78
Gene Name: alkB homolog 7
Gene Symbol: alkbh7    Nomenclature History

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Attributions

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Previous Names: si:rp71-80d13.16, zgc:112404 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to be involved in cellular response to DNA damage stimulus and regulation of mitochondrial membrane permeability involved in programmed necrotic cell death. Predicted to localize to the mitochondrial matrix. Orthologous to human ALKBH7 (alkB homolog 7).
Genome Resources: Alliance (1),  Gene:550272 (1),  Ensembl(GRCz11):ENSDARG00000037906 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7162129]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH alkbh7 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH alkbh7 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to DNA damage stimulus (more)
Cellular Component mitochondrial matrix (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR032870 Alpha-ketoglutarate-dependent dioxygenase alkB homologue 7
Homologous_superfamily IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA alkbh7-201 (1)    Ensembl 1286
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM alkbh7 No data available
MARKER RELATIONSHIPS
alkbh7 Contained in: [BAC] CH211-237K17 (1), RP71-80D13
alkbh7 Encodes: [EST] IMAGE:7162129 (1)
[cDNA] MGC:112404 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001017609 (1) 1303 bp
Genomic GenBank:BX548009 (1) 128639 bp
Select Tool
Polypeptide UniProtKB:Q566X4 (1) 233 aa
Sequence Information (all 11)
ORTHOLOGY for alkbh7 ( Chr: 3 )
CITATIONS (17)