Gene

cnga2b

ID

ZDB-GENE-050307-2

Name

cyclic nucleotide gated channel subunit alpha 2b

Symbol

cnga2b Nomenclature History

Previous Names

cnga2

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have ion channel activity. Predicted to be involved in ion transport and transmembrane transport. Predicted to localize to integral component of membrane. Is expressed in olfactory epithelium; olfactory placode; and olfactory rosette. Orthologous to human CNGA2 (cyclic nucleotide gated channel subunit alpha 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 3 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cnga2b Human Ortholog

No data available

Associated With cnga2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR018488	Cyclic nucleotide-binding, conserved site
Domain	IPR000595	Cyclic nucleotide-binding domain
Domain	IPR005821	Ion transport domain
Domain	IPR032406	Cyclic nucleotide-gated channel, C-terminal leucine zipper domain
Family	IPR050866	Cyclic nucleotide-gated cation channel
Homologous_superfamily	IPR014710	RmlC-like jelly roll fold
Homologous_superfamily	IPR018490	Cyclic nucleotide-binding domain superfamily

Domain Details Per Protein

Protein	Length	Cyclic nucleotide-binding, conserved site	Cyclic nucleotide-binding domain	Cyclic nucleotide-binding domain superfamily	Cyclic nucleotide-gated cation channel	Cyclic nucleotide-gated channel, C-terminal leucine zipper domain	Ion transport domain	RmlC-like jelly roll fold
UniProtKB:A0A0G2KKD9 InterPro
UniProtKB:A0A8M3AS83 InterPro	673
UniProtKB:A0A8M3AZJ6 InterPro	682

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	cnga2-201 (1) Ensembl	Ensembl		1,875 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations