ZFIN is now using GRCz12tu for Genomic Data
Gene
si:ch211-246m6.5
- ID
- ZDB-GENE-050208-577
- Name
- si:ch211-246m6.5
- Symbol
- si:ch211-246m6.5 Nomenclature History
- Previous Names
-
- si:ch73-338d8.1
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable signaling receptor binding activity. Predicted to be involved in animal gross anatomical part developmental process and system development. Predicted to be active in cell surface and extracellular region.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR001846 | von Willebrand factor, type D domain |
| Domain | IPR001881 | EGF-like calcium-binding domain |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR057885 | VWDE-like, Ig-like domain |
| Domain | IPR058727 | Vwde, helical domain |
| Family | IPR050969 | Developmental Signaling Modulators |
| Homologous_superfamily | IPR009030 | Growth factor receptor cysteine-rich domain superfamily |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
Domain Details Per Protein
| Protein | Additional Resources | Length | Developmental Signaling Modulators | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | Growth factor receptor cysteine-rich domain superfamily | Immunoglobulin-like domain | Immunoglobulin-like fold | von Willebrand factor, type D domain | Vwde, helical domain | VWDE-like, Ig-like domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3B5G3 | InterPro | 1983 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
si:ch211-246m6.5-203
(1)
|
Ensembl | 372 nt | ||
| mRNA |
si:ch211-246m6.5-201
(1)
|
Ensembl | 979 nt | ||
| mRNA |
si:ch211-246m6.5-202
(1)
|
Ensembl | 1,827 nt | ||
| mRNA |
si:ch211-246m6.5-204
(1)
|
Ensembl | 316 nt | ||
| mRNA |
si:ch211-246m6.5-205
(1)
|
Ensembl | 414 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers