ZFIN is now using GRCz12tu for Genomic Data
Gene
nisch
- ID
- ZDB-GENE-050208-570
- Name
- nischarin
- Symbol
- nisch Nomenclature History
- Previous Names
-
- sb:eu276
- si:ch1073-288d12.1
- si:ch211-103f16.1
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be active in cytoplasm. Is expressed in hindbrain neural plate. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human NISCH (nischarin).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 9 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7145300 (5 images)
- eu276 (1 image)
- eu290 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001683 | Phox homology |
| Domain | IPR037904 | Nischarin, PX domain |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Homologous_superfamily | IPR036871 | PX domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Additional Resources | Length | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Leucine-rich repeat, typical subtype | Nischarin, PX domain | Phox homology | PX domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AXK5 | InterPro | 510 | ||||||
| UniProtKB:F1QM84 | InterPro | 1406 | ||||||
| UniProtKB:A0A8M2BLN6 | InterPro | 469 |
Interactions and Pathways
No data available
Plasmids
No data available