Gene

amigo3

ID

ZDB-GENE-050208-449

Name

adhesion molecule with Ig-like domain 3

Symbol

amigo3 Nomenclature History

Previous Names

si:ch211-208m13.1
si:ch211-271k12.2 (1)

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to be involved in brain development. Predicted to act upstream of or within cell adhesion. Predicted to be active in membrane. Orthologous to human AMIGO3 (adhesion molecule with Ig like domain 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With amigo3 Human Ortholog

No data available

Associated With amigo3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Family	IPR031283	Amphoterin-induced protein
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily
Repeat	IPR001611	Leucine-rich repeat
Repeat	IPR003591	Leucine-rich repeat, typical subtype
Repeat	IPR025875	Leucine rich repeat 4

Domain Details Per Protein

Protein	Length	Amphoterin-induced protein	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Leucine-rich repeat	Leucine rich repeat 4	Leucine-rich repeat domain superfamily	Leucine-rich repeat, typical subtype
UniProtKB:A0A8M2B8R9 InterPro	486
UniProtKB:M9MMA3 InterPro	486
UniProtKB:A0A8M1PZE7 InterPro	458
UniProtKB:A0A8M9PKB2 InterPro	458

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	amigo3-201 (1) Ensembl	Ensembl		1,461 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations