ZFIN is now using GRCz12tu for Genomic Data
Gene
secisbp2
- ID
- ZDB-GENE-050208-263
- Name
- SECIS binding protein 2
- Symbol
- secisbp2 Nomenclature History
- Previous Names
-
- im:7147048
- si:ch211-261c8.1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz11
- Annotation Status
- Not in current annotation release
- Description
- Predicted to enable mRNA 3'-UTR binding activity; ribonucleoprotein complex binding activity; and selenocysteine insertion sequence binding activity. Predicted to be involved in selenocysteine incorporation. Predicted to be part of ribonucleoprotein complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in thyroid gland disease. Orthologous to human SECISBP2 (SECIS binding protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7147048 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Thyroid hormone metabolism, abnormal, 1 | 609698 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Ribosomal protein eL30-like superfamily | Ribosomal protein eL8/eL30/eS12/Gadd45 | Selenocysteine insertion sequence-binding protein 2 |
|---|---|---|---|---|---|
| UniProtKB:A0AB32TVD8 | InterPro | 636 | |||
| UniProtKB:A0AB32TXJ9 | InterPro | 637 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
secisbp2-201
(1)
|
Ensembl | 1,809 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- No data available