ZFIN is now using GRCz12tu for Genomic Data
Gene

erc1b

ID
ZDB-GENE-041210-51
Name
ELKS/RAB6-interacting/CAST family member 1b
Symbol
erc1b Nomenclature History
Previous Names
  • kim
  • si:ch211-234p1.2
  • si:dkey-222l13.1
  • si:dkey-85m15.2
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Orthologous to human ERC1 (ELKS/RAB6-interacting/CAST family member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
8 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With erc1b Human Ortholog
No data available
Associated With erc1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR019018 Rab-binding domain FIP-RBD
Family IPR019323 ELKS/Rab6-interacting/CAST family member 1
Homologous_superfamily IPR037245 FIP-RBD, C-terminal domain superfamily
Domain Details Per Protein
Protein Additional Resources Length ELKS/Rab6-interacting/CAST family member 1 FIP-RBD, C-terminal domain superfamily Rab-binding domain FIP-RBD
UniProtKB:A0A8M9PV00 InterPro 1093
UniProtKB:A0A8M9Q0Z2 InterPro 1136
UniProtKB:A0A8M9Q685 InterPro 1125
UniProtKB:A0A8M9QBR1 InterPro 1132
UniProtKB:A0A8M3B1J3 InterPro 1121
UniProtKB:A0AC58J9G6 InterPro 1104
UniProtKB:A0A8M6Z641 InterPro 1108
UniProtKB:A0A8M9PHR4 InterPro 1097
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA erc1-201 (1) Ensembl 1,927 nt
mRNA erc1b-201 (1) Ensembl 736 nt
mRNA erc1b-202 (1) Ensembl 439 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations