ZFIN is now using GRCz12tu for Genomic Data
Gene
anks1b
- ID
- ZDB-GENE-041210-349
- Name
- ankyrin repeat and sterile alpha motif domain containing 1B
- Symbol
- anks1b Nomenclature History
- Previous Names
-
- si:ch211-146a9.3
- si:dkey-11k24.3
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ephrin receptor binding activity. Predicted to be involved in ephrin receptor signaling pathway. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human ANKS1B (ankyrin repeat and sterile alpha motif domain containing 1B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001660 | Sterile alpha motif domain |
| Domain | IPR006020 | PTB/PI domain |
| Domain | IPR041880 | Ankyrin repeat and SAM domain-containing protein 1, SAM repeat 1 |
| Domain | IPR041882 | Ankyrin repeat and SAM domain-containing protein 1, SAM repeat 2 |
| Family | IPR033635 | Ankyrin repeat and SAM domain-containing protein 1/Caskin |
| Homologous_superfamily | IPR011993 | PH-like domain superfamily |
| Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
| Homologous_superfamily | IPR036770 | Ankyrin repeat-containing domain superfamily |
| Repeat | IPR002110 | Ankyrin repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Ankyrin repeat | Ankyrin repeat and SAM domain-containing protein 1/Caskin | Ankyrin repeat and SAM domain-containing protein 1, SAM repeat 1 | Ankyrin repeat and SAM domain-containing protein 1, SAM repeat 2 | Ankyrin repeat-containing domain superfamily | PH-like domain superfamily | PTB/PI domain | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A5PMU4 | InterPro | 1280 | |||||||||
| UniProtKB:A0A8M3ARN5 | InterPro | 505 | |||||||||
| UniProtKB:A0A8M9QBA2 | InterPro | 1278 | |||||||||
| UniProtKB:A0A8M6YY21 | InterPro | 1073 | |||||||||
| UniProtKB:A0A0R4IE55 | InterPro | 1281 | |||||||||
| UniProtKB:A0A8M3B8Z5 | InterPro | 1272 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
anks1b-201
(1)
|
Ensembl | 5,375 nt | ||
| mRNA |
anks1b-205
(1)
|
Ensembl | 4,726 nt | ||
| ncRNA |
anks1b-002
(1)
|
Ensembl | 510 nt | ||
| ncRNA |
anks1b-003
(1)
|
Ensembl | 536 nt | ||
| ncRNA |
anks1b-004
(1)
|
Ensembl | 453 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers