Gene

cracd

ID
ZDB-GENE-041210-321
Name
capping protein inhibiting regulator of actin dynamics
Symbol
cracd Nomenclature History
Previous Names
  • fi14c02
  • si:dkeyp-117h8.2
  • wu:fi14c02
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to be involved in maintenance of gastrointestinal epithelium and negative regulation of barbed-end actin filament capping. Predicted to be located in cytosol. Orthologous to human CRACD (capping protein inhibiting regulator of actin dynamics).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa1805Allele with one point mutationUnknownSplice SiteENU
sa39278Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa43443Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With cracd Human Ortholog
No data available
Associated With cracd Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR028030 Domain of unknown function DUF4592
Family IPR052853 Actin dynamics regulator
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Domain Details Per Protein
Protein Additional Resources Length Actin dynamics regulator Domain of unknown function DUF4592
UniProtKB:Q5RG44 InterPro 1079
UniProtKB:A0A8M9PHI5 InterPro 1185
UniProtKB:A0A8M9PBX4 InterPro 1187
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cracd-204 (1)
Ensembl
Ensembl 5,154 nt
ZFIN BLAST
mRNA si:dkeyp-117h8.2-202 (1)
Ensembl
Ensembl 5,245 nt
ZFIN BLAST
mRNA si:dkeyp-117h8.2-203 (1)
Ensembl
Ensembl 538 nt
ZFIN BLAST
ncRNA si:dkeyp-117h8.2-002 (1)
Ensembl
Ensembl 870 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEYP-117H8ZFIN Curated Data
EncodesESTfi14c02
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001347678 (1)5239 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR352243 (2)121253 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8M9PBX4 (1)1187 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanCRACD4
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseCracd5
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
TSV
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