Gene

si:ch211-282j17.3

ID
ZDB-GENE-041210-287
Name
si:ch211-282j17.3
Symbol
si:ch211-282j17.3 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Orthologous to human CLEC20A (C-type lectin domain containing 20A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa26868Allele with one point mutationUnknownPremature StopENU
sa40825Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
1 - 2 of 2
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Sequence Targeting Reagents
No data available
Human Disease
Associated With si:ch211-282j17.3 Human Ortholog
No data available
Associated With si:ch211-282j17.3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018378 C-type lectin, conserved site
Domain IPR001304 C-type lectin-like
Homologous_superfamily IPR016186 C-type lectin-like/link domain superfamily
Homologous_superfamily IPR016187 C-type lectin fold
1 - 4 of 4
Domain Details Per Protein
Protein Additional Resources Length C-type lectin, conserved site C-type lectin fold C-type lectin-like C-type lectin-like/link domain superfamily
UniProtKB:A0A8M1N7C8 InterPro 370
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 7
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch211-282j17.3-201 (1)
Ensembl
Ensembl 1,208 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-282J17ZFIN Curated Data
1 - 1 of 1
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001030222 (1)1208 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR392330 (1)136773 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8M1N7C8 (1)370 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
No data available
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