ZFIN is now using GRCz12tu for Genomic Data
Gene
pcdh2a30
- ID
- ZDB-GENE-041118-5
- Name
- protocadherin 2 alpha 30
- Symbol
- pcdh2a30 Nomenclature History
- Previous Names
-
- pcdh2ab6 (1)
- Type
- protein_coding_gene
- Location
- Ambiguous Mapping Details/Browsers
- Genome Assembly
- GRCz11
- Annotation Status
- Not in current annotation release
- Description
- Predicted to enable cell adhesion molecule binding activity. Predicted to be involved in cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to several human genes including PCDHA8 (protocadherin alpha 8).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Tada et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020894 | Cadherin conserved site |
| Domain | IPR002126 | Cadherin-like |
| Domain | IPR013164 | Cadherin, N-terminal |
| Domain | IPR031904 | Cadherin, C-terminal catenin-binding domain |
| Domain | IPR032455 | Cadherin, cytoplasmic C-terminal domain |
| Family | IPR050174 | Protocadherin/Cadherin-related Cell Adhesion |
| Homologous_superfamily | IPR015919 | Cadherin-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin conserved site | Cadherin, C-terminal catenin-binding domain | Cadherin, cytoplasmic C-terminal domain | Cadherin-like | Cadherin-like superfamily | Cadherin, N-terminal | Protocadherin/Cadherin-related Cell Adhesion |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q60I71 | InterPro | 939 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pcdh2ab6-201
(1)
|
Ensembl | 3,395 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers