ZFIN is now using GRCz12tu for Genomic Data
Gene
pcdh2a36
- ID
- ZDB-GENE-041118-11
- Name
- protocadherin 2 alpha 36
- Symbol
- pcdh2a36 Nomenclature History
- Previous Names
-
- pcdh2ab12 (1)
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cell adhesion molecule binding activity. Predicted to be involved in cell adhesion. Predicted to act upstream of or within homophilic cell-cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to several human genes including PCDHA8 (protocadherin alpha 8).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Tada et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020894 | Cadherin conserved site |
| Domain | IPR002126 | Cadherin-like |
| Domain | IPR013164 | Cadherin, N-terminal |
| Domain | IPR031904 | Cadherin, C-terminal catenin-binding domain |
| Domain | IPR032455 | Cadherin, cytoplasmic C-terminal domain |
| Family | IPR050174 | Protocadherin/Cadherin-related Cell Adhesion |
| Homologous_superfamily | IPR015919 | Cadherin-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin conserved site | Cadherin, C-terminal catenin-binding domain | Cadherin, cytoplasmic C-terminal domain | Cadherin-like | Cadherin-like superfamily | Cadherin, N-terminal | Protocadherin/Cadherin-related Cell Adhesion |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0N4STQ6 | InterPro | 950 | |||||||
| UniProtKB:A0A0N4STY3 | InterPro | 940 | |||||||
| UniProtKB:Q60I65 | InterPro | 940 | |||||||
| UniProtKB:A0A8M1N3Y1 | InterPro | 940 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pcdh2ab12-201
(1)
|
Ensembl | 3,398 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers