Gene

ttc1

ID

ZDB-GENE-041114-80

Name

tetratricopeptide repeat domain 1

Symbol

ttc1 Nomenclature History

Previous Names

im:7143277
zgc:101838

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Orthologous to human TTC1 (tetratricopeptide repeat domain 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:101838 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ttc1 Human Ortholog

No data available

Associated With ttc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR052769	Tetratricopeptide repeat domain-containing protein
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Repeat	IPR019734	Tetratricopeptide repeat

Domain Details Per Protein

Protein	Length	Tetratricopeptide-like helical domain superfamily	Tetratricopeptide repeat	Tetratricopeptide repeat domain-containing protein
UniProtKB:Q5U3P1 InterPro	319

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ttc1-201 (1) Ensembl	Ensembl		1,684 nt	Select Tool ZFIN BLAST
mRNA	ttc1-202 (1) Ensembl	Ensembl		712 nt	Select Tool ZFIN BLAST
mRNA	ttc1-203 (1) Ensembl	Ensembl		987 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations