ZFIN is now using GRCz12tu for Genomic Data
Gene
sgms1a
- ID
- ZDB-GENE-041114-201
- Name
- sphingomyelin synthase 1a
- Symbol
- sgms1a Nomenclature History
- Previous Names
-
- wu:fi06d09
- zgc:91976
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ceramide cholinephosphotransferase activity and sphingomyelin synthase activity. Predicted to be involved in ceramide biosynthetic process and sphingomyelin biosynthetic process. Predicted to be active in Golgi membrane; endoplasmic reticulum membrane; and plasma membrane. Orthologous to human SGMS1 (sphingomyelin synthase 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Sphingomyelin synthase-like | Sphingomyelin synthase-like domain | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:Q5U3Z9 | InterPro | 419 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sgms1a-201
(1)
|
Ensembl | 3,870 nt | ||
| mRNA |
sgms1a-202
(1)
|
Ensembl | 3,856 nt | ||
| mRNA |
sgms1a-203
(1)
|
Ensembl | 4,087 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers