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General Information
ZIRC
ZFIN ID: ZDB-GENE-041111-50
Gene Name: small nuclear RNA activating complex, polypeptide 5
Gene Symbol: snapc5
Sequence Ontology ID : SO:0000704

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Previous Names: im:7138573 (1), si:rp71-14b1.2

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity. Predicted to be involved in transcription by RNA polymerase II and transcription initiation from RNA polymerase III promoter. Predicted to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138573]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH snapc5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH snapc5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process transcription by RNA polymerase II (more)
Cellular Component nucleus (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029138 (1)
  • Pfam:PF15497 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA snapc5-201 (1) 830
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM snapc5 No data available
    MARKER RELATIONSHIPS
    snapc5Contained in: [BAC] RP71-14B1 (1) (order this)
    snapc5Encodes: [EST] IMAGE:7138573 (1) (order this)
    [cDNA] MGC:158751 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080163 (1) 1156bp
    Genomic GenBank:BX323829 (1) 148650bp
    Select Tool
    Polypeptide UniProtKB:Q1LXI0 (1) 115aa
    Sequence Clusters UniGene:90403 (1)
    Sequence Information (all 13)
    ORTHOLOGY for snapc5 (Chr: 18)
    CITATIONS (15)