Gene

atg4da

ID
ZDB-GENE-041111-102
Name
autophagy related 4D, cysteine peptidase a
Symbol
atg4da Nomenclature History
Previous Names
  • im:7140072 (1)
  • si:ch211-212h16.5 (1)
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have cysteine-type peptidase activity. Involved in cerebellar Purkinje cell differentiation and cerebellar neuron development. Predicted to localize to cytoplasm. Orthologous to human ATG4D (autophagy related 4D cysteine peptidase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Kyöstilä et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With atg4da Human Ortholog
No data available
Associated With atg4da Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR046792 Peptidase C54, catalytic domain
Family IPR005078 Peptidase C54
Homologous_superfamily IPR038765 Papain-like cysteine peptidase superfamily
Domain Details Per Protein
Protein Length Papain-like cysteine peptidase superfamily Peptidase C54 Peptidase C54, catalytic domain
UniProtKB:R4GER2 485
UniProtKB:A0A8M9Q0Z1 485
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA atg4da-201 (1) Ensembl 1,392 nt
mRNA atg4da-202 (1) Ensembl 4,671 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations