Gene

dpf2

ID
ZDB-GENE-041024-2
Name
double PHD fingers 2
Symbol
dpf2 Nomenclature History
Previous Names
  • im:7146797
  • zgc:101789
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have histone acetyltransferase activity and histone binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated; nervous system development; and positive regulation of transcription by RNA polymerase II. Predicted to localize to histone acetyltransferase complex and nBAF complex. Is expressed in brain; epiphysis; and spinal cord. Orthologous to human DPF2 (double PHD fingers 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With dpf2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Coffin-Siris syndrome 7 Alliance Coffin-Siris syndrome 7 618027
Associated With dpf2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001965 Zinc finger, PHD-type
Domain IPR013087 Zinc finger C2H2-type
Domain IPR019787 Zinc finger, PHD-finger
Domain IPR025750 DPF1-3, N-terminal domain
Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Domain Details Per Protein
Protein Length DPF1-3, N-terminal domain Zinc finger C2H2 superfamily Zinc finger C2H2-type Zinc finger, FYVE/PHD-type Zinc finger, PHD-finger Zinc finger, PHD-type Zinc finger, RING/FYVE/PHD-type
UniProtKB:Q5XJL8 400
UniProtKB:A0A8M3B9T0 410
UniProtKB:A0A8M9Q8I8 324
UniProtKB:A0A8M2BCR7 414
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA dpf2-201 (1) Ensembl 1,708 nt
mRNA dpf2-203 (1) Ensembl 539 nt
mRNA dpf2-205 (1) Ensembl 486 nt
ncRNA dpf2-004 (1) Ensembl 509 nt
ncRNA dpf2-005 (1) Ensembl 997 nt
ncRNA dpf2-006 (1) Ensembl 421 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations