Gene

si:dkey-241l7.2

ID
ZDB-GENE-041014-240
Name
si:dkey-241l7.2
Symbol
si:dkey-241l7.2 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to enable signaling receptor activity. Human ortholog(s) of this gene implicated in type 1 diabetes mellitus. Orthologous to several human genes including REG4 (regenerating family member 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With si:dkey-241l7.2 Human Ortholog
No data available
Associated With si:dkey-241l7.2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018378 C-type lectin, conserved site
Domain IPR001304 C-type lectin-like
Family IPR002353 Type-2 ice-structuring protein
Family IPR050111 C-type lectin and snaclec domain-containing protein
Homologous_superfamily IPR016186 C-type lectin-like/link domain superfamily
1 - 5 of 6 Show all
Domain Details Per Protein
Protein Additional Resources Length C-type lectin and snaclec domain-containing protein C-type lectin, conserved site C-type lectin fold C-type lectin-like C-type lectin-like/link domain superfamily Type-2 ice-structuring protein
UniProtKB:A0A140LFS0 InterPro 153
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:dkey-241l7.2-201 (1)
Ensembl
Ensembl 621 nt
ZFIN BLAST
mRNA si:dkey-241l7.2-202 (1)
Ensembl
Ensembl 753 nt
ZFIN BLAST
mRNA si:dkey-241l7.2-203 (1)
Ensembl
Ensembl 568 nt
ZFIN BLAST
1 - 3 of 3
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-241L7ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001245035 (1)755 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR381646 (1)183151 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A140LFS0 (1)153 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
1 - 1 of 1
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