Gene

stum

ID
ZDB-GENE-041014-164
Name
stum, mechanosensory transduction mediator homolog
Symbol
stum Nomenclature History
Previous Names
  • si:dkeyp-59a8.4
  • wu:fq26c01
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to be located in membrane. Is expressed in nervous system. Orthologous to human STUM (stum, mechanosensory transduction mediator homolog).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from Rauch et al., 2003
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With stum Human Ortholog
No data available
Associated With stum Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR026673 SPEC3/Stum
1 - 1 of 1
Domain Details Per Protein
Protein Length SPEC3/Stum
UniProtKB:Q5TYP8
InterPro
128
UniProtKB:A0A8M2B7P8
InterPro
130
1 - 2 of 2
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA stum-201 (1)
Ensembl
Ensembl 1,306 nt
ZFIN BLAST
mRNA stum-202 (1)
Ensembl
Ensembl 580 nt
ZFIN BLAST
mRNA stum-203 (1)
Ensembl
Ensembl 540 nt
ZFIN BLAST
mRNA stum-204 (1)
Ensembl
Ensembl 1,296 nt
ZFIN BLAST
1 - 4 of 4
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEYP-59A8ZFIN Curated Data
EncodesESTfq26c01Rauch et al., 2003
1 - 2 of 2
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001030171 (1)1309 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX957287 (1)154419 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8M2B7P8 (1)130 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSTUM1
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseStum1
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
1 - 2 of 2
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