Gene

tmem120ab

ID

ZDB-GENE-041010-17

Name

transmembrane protein 120Ab

Symbol

tmem120ab Nomenclature History

Previous Names

zgc:103681

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to be involved in fat cell differentiation. Predicted to be located in nuclear inner membrane. Predicted to be active in membrane. Orthologous to human TMEM120A (transmembrane protein 120A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

No data available

Sequence Targeting Reagents

No data available

Human Disease

Associated With tmem120ab Human Ortholog

No data available

Associated With tmem120ab Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M9Q0B0	InterPro	315
UniProtKB:Q5XJ49	InterPro	337

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Transcripts

Genome Browsers

Genome Build: GRCz11Chromosome: 15

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	zgc:103681-201 (1) Ensembl	Ensembl		1,641 nt	Select Tool ZFIN BLAST

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Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

No data available

Marker Relationships

Relationship	Marker Type	Marker	Accession Numbers	Citations
Contained in	BAC	CH211-214G1	BX571762	ZFIN Curated Data
Contained in	BAC	DKEY-148C4	BX649487	ZFIN Curated Data
Encodes	cDNA	MGC:103681	BC083460	ZFIN Curated Data
Encodes	cDNA	MGC:172239	BC155631	ZFIN Curated Data

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Sequences

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001005946 (1)	1661 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX649487 (1)	201933 nt	Select Tool MegaBLAST
Polypeptide	UniProtKB:Q5XJ49 (1)	337 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Species	Symbol	Chromosome	Accession #	Evidence
Human	TMEM120A	7	Ensembl:ENSG00000189077 Gene:83862 HGNC:21697 OMIM:616550	Amino acid sequence comparison (1) Conserved genome location (synteny) (1) Phylogenetic tree (1)
Mouse	Tmem120a	5	Ensembl:ENSMUSG00000039886 Gene:215210 MGI:2686991	Conserved genome location (synteny) (1) Phylogenetic tree (1) Amino acid sequence comparison (1)

Citations

Include unpublished citations

Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903

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