Gene

cmss1

ID

ZDB-GENE-041010-146

Name

cms1 ribosomal small subunit homolog

Symbol

cmss1 Nomenclature History

Previous Names

zgc:101814

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Is expressed in several structures, including alar plate midbrain region; immature eye; midbrain; neural plate; and segmental plate. Orthologous to human CMSS1 (cms1 ribosomal small subunit homolog).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:101814 (16 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cmss1 Human Ortholog

No data available

Associated With cmss1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR032704	Protein Cms1
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase

Domain Details Per Protein

Protein	Length	P-loop containing nucleoside triphosphate hydrolase	Protein Cms1
UniProtKB:A0A8M9QAN3 InterPro	291
UniProtKB:Q5XJK9 InterPro	291

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	cmss1-202 (1) Ensembl	Ensembl		1,054 nt	Select Tool
mRNA	cmss1-203 (1) Ensembl	Ensembl		1,804 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations