Gene

riox1

ID
ZDB-GENE-041008-221
Name
ribosomal oxygenase 1
Symbol
riox1 Nomenclature History
Previous Names
  • im:7141580
  • no66a (1)
  • zgc:162967
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have histone demethylase activity (H3-K36 specific); histone demethylase activity (H3-K4 specific); and iron ion binding activity. Predicted to be involved in histone lysine demethylation; negative regulation of osteoblast differentiation; and negative regulation of transcription, DNA-templated. Predicted to localize to nucleolus. Orthologous to human RIOX1 (ribosomal oxygenase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With riox1 Human Ortholog
No data available
Associated With riox1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003347 JmjC domain
Domain IPR049043 RIOX1/NO66-like, C-terminal winged helix domain
Family IPR039994 Histone lysine demethylase/ribosomal histidine hydroxylase NO66-like
Domain Details Per Protein
Protein Length Histone lysine demethylase/ribosomal histidine hydroxylase NO66-like JmjC domain RIOX1/NO66-like, C-terminal winged helix domain
UniProtKB:A3KP59 544
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA riox1-201 (1) Ensembl 1701 nt
mRNA riox1-202 (1) Havana 1308 nt
mRNA riox1-203 (1) Ensembl 1842 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations