Gene

taf1b

ID
ZDB-GENE-041008-2
Name
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B
Symbol
taf1b Nomenclature History
Previous Names
  • si:dkey-81b15.4 (1)
  • zgc:110402
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have RNA polymerase I core promoter sequence-specific DNA binding activity. Predicted to be involved in nucleolar large rRNA transcription by RNA polymerase I. Predicted to localize to RNA polymerase I core factor complex and RNA polymerase transcription factor SL1 complex. Orthologous to human TAF1B (TATA-box binding protein associated factor, RNA polymerase I subunit B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With taf1b Human Ortholog
No data available
Associated With taf1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR021752 Transcription initiation factor Rrn7, Zinc-finger
Domain IPR048538 Rrn7/TAF1B, C-terminal cyclin domain
Domain IPR048540 Rrn7/TAF1B, N-terminal cyclin domain
Family IPR033599 RNA polymerase I transcription initiation factor TAF1B/Rrn7
Domain Details Per Protein
Protein Length RNA polymerase I transcription initiation factor TAF1B/Rrn7 Rrn7/TAF1B, C-terminal cyclin domain Rrn7/TAF1B, N-terminal cyclin domain Transcription initiation factor Rrn7, Zinc-finger
UniProtKB:F1R3W0 576
UniProtKB:Q4KMI1 576
UniProtKB:A0A8M9P2J7 486
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA taf1b-201 (1) Ensembl 2,775 nt
mRNA taf1b-202 (1) Ensembl 2,802 nt
ncRNA taf1b-002 (1) Ensembl 725 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations