ZFIN is now using GRCz12tu for Genomic Data
Gene
nitr1f
- ID
- ZDB-GENE-041001-83
- Name
- novel immune-type receptor 1f
- Symbol
- nitr1f Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz11
- Annotation Status
- Not in current annotation release
- Description
- Orthologous to human SIRPB2 (signal regulatory protein beta 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Family | IPR052051 | T cell receptor complex component |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain | T cell receptor complex component |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A3KFQ2 | InterPro | 327 | ||||||
| UniProtKB:A0AB12XQK3 | InterPro | 327 | ||||||
| UniProtKB:A0AB32TUY1 | InterPro | 317 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA | nitr1f-001 (1) | Havana | 1,031 nt | ||
| mRNA |
nitr1f-201
(1)
|
Ensembl | 1,031 nt | ||
| mRNA | ottdart00000001570 (1) | Havana | 1,028 nt | ||
| mRNA | ottdart00000004093 (1) | Havana | 984 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers