ZFIN is now using GRCz12tu for Genomic Data
Gene
si:busm1-71b9.3
- ID
- ZDB-GENE-041001-54
- Name
- si:busm1-71b9.3
- Symbol
- si:busm1-71b9.3 Nomenclature History
- Previous Names
-
- si:dkey-173l11.2
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable beta-catenin binding activity and cadherin binding activity. Predicted to be involved in several processes, including calcium-dependent cell-cell adhesion; cell-cell adhesion mediated by cadherin; and cell-cell junction organization. Predicted to be located in plasma membrane. Predicted to be part of catenin complex. Predicted to be active in adherens junction and cytoplasm.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin | Cadherin conserved site | Cadherin-like | Cadherin-like superfamily | Cadherin prodomain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9Q8X4 | InterPro | 460 | |||||
| UniProtKB:A0A8M2BE24 | InterPro | 461 | |||||
| UniProtKB:A0A8M9Q2S9 | InterPro | 597 | |||||
| UniProtKB:A0A8M6Z095 | InterPro | 348 | |||||
| UniProtKB:A0AB32TV70 | InterPro | 820 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA | si:busm1-71b9.3-001 (1) | Havana | 2,376 nt | ||
| ncRNA |
ottdart00000036904
(1)
|
Ensembl | 1,459 nt | ||
| pseudogenic transcript |
si:busm1-71b9.3-002
(1)
|
Ensembl | 2,380 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers