Gene

ankef1a

ID

ZDB-GENE-041001-196

Name

ankyrin repeat and EF-hand domain containing 1a

Symbol

ankef1a Nomenclature History

Previous Names

ankrd5a
si:dkey-20n10.1

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Orthologous to human ANKEF1 (ankyrin repeat and EF-hand domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from Daniel et al., 2019

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ankef1a Human Ortholog

No data available

Associated With ankef1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR052801	Ankyrin Repeat and EF-hand Domain-containing
Homologous_superfamily	IPR011992	EF-hand domain pair
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin Repeat and EF-hand Domain-containing	Ankyrin repeat-containing domain superfamily	EF-hand domain pair
UniProtKB:Q5TZ64 InterPro	779

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ankef1a-201 (1) Ensembl	Ensembl		3,813 nt	Select Tool
mRNA	ankef1a-202 (1) Ensembl	Ensembl		2,340 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations