Gene

itga6l

ID

ZDB-GENE-040914-57

Name

integrin, alpha 6, like

Symbol

itga6l Nomenclature History

Previous Names

im:6912374 (1)
si:ch211-221c23.3 (1)

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to be involved in cell adhesion and integrin-mediated signaling pathway. Predicted to localize to integrin complex.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6912374 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With itga6l Human Ortholog

No data available

Associated With itga6l Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013649	Integrin alpha, first immunoglubulin-like domain
Domain	IPR048285	Integrin alpha, second immunoglobulin-like domain
Domain	IPR048286	Integrin alpha, third immunoglobulin-like domain
Family	IPR000413	Integrin alpha chain
Homologous_superfamily	IPR028994	Integrin alpha, N-terminal
Homologous_superfamily	IPR032695	Integrin domain superfamily
Repeat	IPR013517	FG-GAP repeat
Repeat	IPR013519	Integrin alpha beta-propellor

Domain Details Per Protein

Protein	Length	FG-GAP repeat	Integrin alpha beta-propellor	Integrin alpha chain	Integrin alpha, first immunoglubulin-like domain	Integrin alpha, N-terminal	Integrin alpha, second immunoglobulin-like domain	Integrin alpha, third immunoglobulin-like domain	Integrin domain superfamily
UniProtKB:A0A8M9QPM6 InterPro	786
UniProtKB:A0A8M9Q5D4 InterPro	602
UniProtKB:A0A8M9PUM7 InterPro	416

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	itga6l-201 (1) Ensembl	Ensembl	7,324 nt	Select Tool ZFIN BLAST
mRNA	itga6l-203 (1) Ensembl	Ensembl	3,432 nt	Select Tool
mRNA	itga6l-204 (1) Ensembl	Ensembl	723 nt	Select Tool
mRNA	itga6l-205 (1) Ensembl	Ensembl	7,165 nt	Select Tool ZFIN BLAST
ncRNA	itga6l-003 (1) Ensembl	Ensembl	622 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations