Gene
calcrla
- ID
- ZDB-GENE-040822-26
- Name
- calcitonin receptor-like a
- Symbol
- calcrla Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to enable adrenomedullin receptor activity and calcitonin gene-related peptide receptor activity. Acts upstream of or within blood vessel morphogenesis; chloride ion homeostasis; and somitogenesis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including cardiovascular system; neural tube; pleuroperitoneal region; trunk; and ventral mesoderm. Human ortholog(s) of this gene implicated in hereditary lymphedema. Orthologous to human CALCRL (calcitonin receptor like receptor).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 10 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7141310 (4 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
?Lymphatic malformation 8 | 618773 |
1 - 1 of 1
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR017983 | GPCR, family 2, secretin-like, conserved site |
Domain | IPR001879 | GPCR, family 2, extracellular hormone receptor domain |
Domain | IPR017981 | GPCR, family 2-like, 7TM |
Family | IPR000832 | GPCR, family 2, secretin-like |
Family | IPR003287 | GPCR, family 2, calcitonin receptor family |
1 - 5 of 8 Show all
Domain Details Per Protein
Protein | Additional Resources | Length | GPCR, family 2, calcitonin gene-related peptide, type 1 receptor | GPCR, family 2, calcitonin receptor family | GPCR, family 2, extracellular hormone receptor domain | GPCR family 2, extracellular hormone receptor domain superfamily | GPCR, family 2-like, 7TM | GPCR, family 2, secretin-like | GPCR, family 2, secretin-like, conserved site | G-protein coupled receptor 2 |
---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:Q68EK2 | InterPro | 470 |
1 - 1 of 1
- Genome Browsers
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
calcrla-201
(1)
|
Ensembl | 1,684 nt |
1 - 1 of 1
Interactions and Pathways
No data available
Plasmids
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | DKEY-249O24 | ZFIN Curated Data | |
Encodes | EST | IMAGE:7141310 | Thisse et al., 2004 | |
Encodes | cDNA | MGC:100872 | ZFIN Curated Data | |
Encodes | cDNA | MGC:158571 | ZFIN Curated Data |
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Show
Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001004010 (1) | 5350 nt | ||
Genomic | GenBank:BX470245 (1) | 132054 nt | ||
Polypeptide | UniProtKB:Q68EK2 (1) | 470 aa |