Gene

fnbp1l

ID

ZDB-GENE-040801-155

Name

formin binding protein 1-like

Symbol

fnbp1l Nomenclature History

Previous Names

zgc:100923

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to be involved in endocytosis. Is expressed in several structures, including central nervous system; midbrain neural keel; neural plate; pronephric duct; and ventral mesoderm. Orthologous to human FNBP1L (formin binding protein 1 like).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

12 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7140033 (5 images)
IMAGE:7145379 (5 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With fnbp1l Human Ortholog

No data available

Associated With fnbp1l Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001060	FCH domain
Domain	IPR001452	SH3 domain
Domain	IPR011072	HR1 rho-binding domain
Domain	IPR031160	F-BAR domain
Domain	IPR035493	FNBP1L, SH3 domain
Domain	IPR035494	FNBP1L, F-BAR domain
Homologous_superfamily	IPR027267	AH/BAR domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Length	AH/BAR domain superfamily	F-BAR domain	FCH domain	FNBP1L, F-BAR domain	FNBP1L, SH3 domain	HR1 rho-binding domain	SH3 domain	SH3-like domain superfamily
UniProtKB:A0A0R4IAX0 InterPro	599
UniProtKB:Q6DEK3 InterPro	548
UniProtKB:A0A8M9PQU2 InterPro	400
UniProtKB:A0A8M9QDQ3 InterPro	595

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	fnbp1l-201 (1) Ensembl	Ensembl	2,085 nt	Select Tool
mRNA	fnbp1l-204 (1) Ensembl	Ensembl	2,164 nt	Select Tool ZFIN BLAST
mRNA	fnbp1l-205 (1) Ensembl	Ensembl	1,999 nt	Select Tool ZFIN BLAST
ncRNA	fnbp1l-002 (1) Ensembl	Ensembl	820 nt	Select Tool
ncRNA	fnbp1l-003 (1) Ensembl	Ensembl	370 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations