Gene

cacna1aa

ID
ZDB-GENE-040724-26
Name
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a
Symbol
cacna1aa Nomenclature History
Previous Names
  • cacna1a (1)
  • si:ch211-237k17.1
  • ZfCav2.1 (1)
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to enable high voltage-gated calcium channel activity. Predicted to be involved in calcium ion import across plasma membrane and chemical synaptic transmission. Predicted to act upstream of or within calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Predicted to be active in neuronal cell body. Is expressed in heart and nervous system. Used to study absence epilepsy. Human ortholog(s) of this gene implicated in brain disease (multiple) and episodic ataxia type 2. Orthologous to human CACNA1A (calcium voltage-gated channel subunit alpha1 A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
10 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from Gawel et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cacna1aa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
developmental and epileptic encephalopathy 42 Alliance Developmental and epileptic encephalopathy 42 617106
episodic ataxia type 2 Alliance Episodic ataxia, type 2 108500
familial hemiplegic migraine 1 Alliance Migraine, familial hemiplegic, 1 141500
familial hemiplegic migraine 1 Alliance Migraine, familial hemiplegic, 1, with progressive cerebellar ataxia 141500
spinocerebellar ataxia type 6 Alliance Spinocerebellar ataxia 6 183086
Associated With cacna1aa Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005821 Ion transport domain
Domain IPR014873 Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
Domain IPR031649 Voltage-dependent L-type calcium channel, IQ-associated domain
Family IPR002077 Voltage-dependent calcium channel, alpha-1 subunit
Family IPR050599 Voltage-dependent calcium channel alpha-1 subunit
Homologous_superfamily IPR027359 Voltage-dependent channel domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Ion transport domain Voltage-dependent calcium channel alpha-1 subunit Voltage-dependent calcium channel, alpha-1 subunit Voltage-dependent calcium channel, alpha-1 subunit, IQ domain Voltage-dependent channel domain superfamily Voltage-dependent L-type calcium channel, IQ-associated domain
UniProtKB:A0A8M3AR05 InterPro 2318
UniProtKB:A0A8M9PFW8 InterPro 2344
UniProtKB:A0A8M9PYT6 InterPro 2367
UniProtKB:A0A8M3AY50 InterPro 2293
UniProtKB:A0A8M9Q9V1 InterPro 1615
UniProtKB:A0A8M9PFV0 InterPro 2333
UniProtKB:A0A8M9PYS3 InterPro 2370
UniProtKB:A0A8M9PSR1 InterPro 2368
UniProtKB:A0A8M9PSW2 InterPro 2165
UniProtKB:A0A8M9PSS9 InterPro 2362
UniProtKB:A0A8M9Q509 InterPro 2370
UniProtKB:A0A8M9Q9Q4 InterPro 2368
UniProtKB:A0A8M9PFQ8 InterPro 2371
UniProtKB:A0A8M3B8D7 InterPro 2357
UniProtKB:A0A8M9Q9T2 InterPro 2354
UniProtKB:A0A8M9PSR6 InterPro 2367
UniProtKB:A0A8M9PSV7 InterPro 2319
UniProtKB:A0A8M9PYU4 InterPro 2363
UniProtKB:A0A8M3B129 InterPro 2310
UniProtKB:A0A8M9PSU9 InterPro 2332
UniProtKB:A0A8M9Q515 InterPro 2370
UniProtKB:A0A8M6Z5Q8 InterPro 2356
UniProtKB:A0A8M9Q9N8 InterPro 2371
UniProtKB:A0A8M2BBB9 InterPro 1740
UniProtKB:A0A8M9PFV9 InterPro 2307
UniProtKB:A0A8M9PSS2 InterPro 2366
UniProtKB:A0A8M9PFU0 InterPro 2362
UniProtKB:A0A8M9Q554 InterPro 2344
UniProtKB:A0AB32THB7 InterPro 2352
UniProtKB:A0AB32THB8 InterPro 2358
UniProtKB:A0AB32THD2 InterPro 2313
UniProtKB:A0AB32TIN8 InterPro 2365
UniProtKB:A0AB32TIS7 InterPro 2366
UniProtKB:A0AB32TIU4 InterPro 2349
UniProtKB:A0AB32TK22 InterPro 2328
UniProtKB:A0AB32TKC4 InterPro 2351
UniProtKB:A0AB32TKG5 InterPro 2365
UniProtKB:A0AB32TKJ4 InterPro 2302
UniProtKB:A0AB32TL46 InterPro 2160
UniProtKB:A0AB32TMG8 InterPro 2363
UniProtKB:A0AB32TMW7 InterPro 2366
UniProtKB:A0AB32TPF9 InterPro 2363
UniProtKB:A0AB32TPN7 InterPro 2327
UniProtKB:A0AB32TQZ9 InterPro 2314
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cacna1aa-201 (1) Ensembl 6,798 nt
mRNA cacna1aa-202 (1) Ensembl 5,851 nt
mRNA cacna1aa-203 (1) Ensembl 5,848 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations